MiClip 1.3 Installation
By Güngör Budak
- One minute read - 72 wordsMiClip is a CLIP-seq data peak calling algorithm implemented in R but currently it doesn’t show up in the CRAN but you can obtain it from the archive and install from the source or tar.gz file.
Download the tar.gz file:
wget https://cran.r-project.org/src/contrib/Archive/MiClip/MiClip_1.3.tar.gz
Start R:
R
Install dependencies:
1install.packages("moments")
2install.packages("VGAM")
Finally install MiClip 1.3:
1install.packages("MiClip_1.3.tar.gz", repos = NULL, type="source")
Then you can test it by loading the package and viewing its help file.