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JointSNVMix Installation on Linux Mint 16 Cython, Pysam Included
JointSNVMix is a software package that consists of a number of tools for calling somatic mutations in tumour/normal paired NGS data.
It requires Python (>= 2.7), Cython (>= 0.13) and Pysam (== 0.5.0).
Python must be installed by default ona Linux machine so I will describe the installation of others and JointSNVMix.
Note this guide may become outdated after some time so please make sure before following all.
Install Cython