Below you will find pages that utilize the taxonomy term “geoquery”
Blog
How to Get (or Load) NCBI GEO Microarray Data into R using GEOquery Package from Bioconductor
R, especially with lots of Bioconductor packages, provides nice tools to load, manage and analyze microarray data. If you are trying to load NCBI GEO data into R, use GEOquery package. Here, I’ll describe how to start with it and probably in my future posts I’ll mention more.
Installation
1source("http://bioconductor.org/biocLite.R") 2biocLite("GEOquery") Usage
1library(GEOquery) 2gds <- getGEO("GDS5072") or
1library(GEOquery) 2gds <- getGEO(filename="path/to/GDS5072.soft.gz") getGEO function return a complex class type GDS object which contains the complete dataset.