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MiClip 1.3 Installation
MiClip is a CLIP-seq data peak calling algorithm implemented in R but currently it doesn’t show up in the CRAN but you can obtain it from the archive and install from the source or tar.gz file.
Download the tar.gz file:
wget https://cran.r-project.org/src/contrib/Archive/MiClip/MiClip_1.3.tar.gz Start R:
R Install dependencies:
1install.packages("moments") 2install.packages("VGAM") Finally install MiClip 1.3:
1install.packages("MiClip_1.3.tar.gz", repos = NULL, type="source") Then you can test it by loading the package and viewing its help file.