Research
Publications
(2023) Whole Genome Sequencing for Metastatic Mutational Burden in Extraskeletal Myxoid Chondrosarcoma
Published on Frontiers in Molecular Medicine
(2022) Pan-African genome demonstrates how population-specific genome graphs improve high-throughput sequencing data analysis
Published on Nature Communications
(2022) PrecisionFDA Truth Challenge V2: Calling variants from short and long reads in difficult-to-map regions
Published on Cell Genomics
(2018) Express: A database of transcriptome profiles encompassing known and novel transcripts across multiple development stages in eye tissues
Published on Experimental Eye Research
(2017) Transcriptome analysis of developing lens reveals abundance of novel transcripts and extensive splicing alterations
Published on Scientific Reports
(2017) Seten: a tool for systematic identification and comparison of processes, phenotypes, and diseases associated with RNA-binding proteins from condition-specific CLIP-seq profiles.
Published on RNA
(2016) ExSurv: A Web Resource for Prognostic Analyses of Exons Across Human Cancers Using Clinical Transcriptomes
Published on Cancer Informatics
(2016) Inferring causal molecular networks: empirical assessment through a community-based effort
Published on Nature Methods
(2015) Reconstruction of the temporal signaling network in Salmonella-infected human cells
Published on Front. Microbiol.
(2013) Analysis of the dataset on four breast cancer cell lines to build network models that represent the active cell signaling pathways in breast cancer
Published on Nature Methods
(2012) Contaminant detection and identification in Next-Generation Sequencing data by developing a pipeline which extracts the unmapped reads and compares the possible contaminant genomes in different databases using Perl programming language
Published on F1000Posters
(2011) Development of a web-based software that constructs functional genetic devices with the input and output parameters which are defined as the activator of promoters and the products of coding sequences, respectively
Published on IEEE Xplore
(2011) Design of a biosensor that can detect MRSA (Methicillin-resistant S. aureus)